John Hemming's Web Log

On 19-20 June 2023 I attended the conference of the UK Autophagy network. They have a website for the conference here and https://twitter.com/autophagyuk is their twitter account. This was a really interesting conference. My degree is in Physics specialising in Theoretical, Atomic and Nuclear physics. However, I have spent a lot of time reading up on molecular biology in the last few years. This is mainly to improve the health of my own cells which I believe (with some evidence) will improve my health as an individual. I have ended up as a biohacker, which is someone who uses cutting edge science to improve their own health making their own decisions. I am pleased that the UK Autophagy network decided they would allow me as a biohacker - they described me as an Independent Student - to attend their conference. Autophagy comes from the greek words which imply "eating oneself". It is a key part of cellular metabolism. In many ways it is obvious why Autophagy would b

I have been reading up on the issues around acetylation of the histone and I have some ideas as to the interplay between acetylation and deacetylation. There are two steps in creating proteins. The first is called "transcription". This is where a complex called RNA Polymerase II (RNA Pol II or RNAPII) travels down the gene creating messenger RNA (mRNA) as essentially a local copy. The second is "translation" where proteins get created from the mRNA. Although I think there are important metabolic constraints on protein creation in this post I am going to concentrate on "transcription". One of the key things about Transcription is that for RNA Pol II to get at the genes to copy from them the genes need to be opened up. The opening up process is where an acetyl group (think vinegar without the hydrogen ion or oxygen which would attract the hydrogen) is added to the histone which holds the DNA. This causes it to open up as a result of the electric char

Nicotinamide adenine dinucleotide (NAD) is a chemical found in cells which is at the centre of many metabolic processes. It has been noted by many people that NAD levels go down as people get older. I won't go into any of the details of the impact of this as it can be read in many other places. This is just one of many articles about this. I am not citing it particularly, but it is one I found in a few second searching on the net. Recently Michael Lustgarten produced a video: I have linked to the video to a point at which the alternative route of producing NAD from Tryptophan is highlighted Most of the discussions about NAD relate to how it is produced from different versions of vitamin B3 which includes NMN and NR. Indeed there have been many debates about what is the best way to increase NAD+. The video got me thinking. The video highlights how there is an increase in the metabolite (3-hydroxy-l-kynurenine) produced by Kynurenine 3-monooxygenase (which is produced

I came across this story written by a friend about a national scandal that I consider raises issues of concern about the provision of housing for vulnerable groups and Labour failures. According to a report by independent peer Lord Kerslake, "The Kerslake Review", Labour controlled Lambeth council has wasted £25 million funding a failed private housing company, Homes for Lambeth. Worse, it appears at least one senior executive on a choice salary, Paul Simpson, was a former Labour Party staffer who made a career jump from one-man-band communications consultant to Head of Communications and Operations. Simpson's extensive LinkedIn profile takes credit for a number of areas which Kerslake said were failing. The author, Sam Smith of Matthew Hopkins News has written a lengthy and careful in-depth article . As well as raising the Kerslake Review, he raised historic issues since he worked with Simpson many years ago, which of course only he knows about, but which are consisten

Biohacking has come more into the public domain with the publicity around Bryan Johnson's blueprint . Bryan Johnson is someone who is a tech entrepreneur who sold one of his businesses a few years ago and has since being trying to improve his health. This has been described in the media as him spending about USD 2 million a year with try to get his body to be the equivalent of an 18 year olds. However, it is probably best to read his website (that I have linked to) to see what he describes this as. There are quite a lot of people who are doing similar things, but not necessarily spending as much or promoting what they are doing to the same extent. His website provides quite a bit of information, but sadly at the moment it is not as useful as it could be as he does not always link to the relevant research papers or specify the units of the measurements he quotes. Hopefully that will be fixed over time. Dr Michael Lustgarten is similar to Bryan Johnson in that he publicises

We know Vitamin D exists. We know that people suffer if they don't have enough of it. However, it raises an interesting question as to why we evolved to create a vitamin in the summer which gets stored and then gradually fades away during the winter. I have an idea. Historically food was more plentiful in the summer and less available in the winter. The genes that rely on vitamin D don't function without it. Hence the body requires less energy. There are a number of things which operate to adjust metabolism to fit food availability. I think Vitamin D evolved to provide an annual metabolic cycle so things which could wait which required energy did not operate. That gives an idea as to what functions we would expect to depend on vitamin D. It would be those functions which are useful, but not essential all year round. The Vitamin D Receptor Inhibits the Respiratory Chain, Contributing to the Metabolic Switch that Is Essential for Cancer Cell Proliferation is an intere